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General
Full Name | Tatsuya Hattori |
Contact | 6422539@ed.tus.ac.jp |
Languages | Japanese (Native), English (Beginner) |
Interests | Bioinformatics, Epigenetics, Data Science, Labolatory automation, 3D print, VR |
Experience
- 2024-04 - present
Bioinformatics Researcher
- Daiichi-Sankyo Co., Ltd.
- 2023
"Picmobi" (Finalists, Recipient of BIPROGY Award and TomyK Award)
- Division of University Corporate Relations, University of Tokyo
- The service allows users to simply take a photo of the desired items, and our system coordinates the delivery of the products to a nearby hub.
- Developed a Web app, an image recognition system for identifying products, and a location tracking system using Raspberry Pi with GNSS sensor-based technology.
- 2022
Research Assistant
- Tokyo University of Science
- Molecular biological experiment (RNA-seq, ATAC-seq, CUT&Tag, WGS, Mouse maintainance)
- NGS analysis (RNA-seq, ATAC-seq, scRNA-seq, scATAC-seq, CUT&Tag, WGS)
- 2022 - 2024
Teaching Assistant
- Tokyo University of Science
- Bioinformatics
- Python, Google Colabolatory
- 2022
"Mobile trash can"
- Division of University Corporate Relations, University of Tokyo
- As a leader, developed a trash can that moves in response to voice.
- Raspberry pi, ROS (Melodic), LiDAR (RPLIDAR), OpenCV, Docker
- 2020 - 2024
Bioinformatics Engineer - Amelieff
- Amelieff Corp.
- Linux, Python, R, AWS, Docker, Researching, NGS analysis (RNA-seq, scRNA-seq, ATAC-seq, scATAC-seq, ChIP-seq, CUT&RUN, Re-seq, GWAS, Metagenomics, Long-read sequencer)
- 2021
Bioinformatics Researcher - University of Tokyo
- University of Tokyo
- Research about single-cell tools.
- Jupyter Notebook, Google Colabolatory, NGS, Single-cell genomics
- 2019 - 2020
iGEM 2020 (Silver Medal)
- International Genetically Engineered Machine Competition
- Exploring the conversion of nicotine into useful substances using genetic engineering to create a "Nico-friendly" society and prevent ecological damage from cigarette butt litter by adding value to discarded materials.
- 2019
iGEM 2019 (Bronze Medal)
- International Genetically Engineered Machine Competition
- Investigating genetic combinations to enhance E. coli 's radiation resistance by studying Deinococcus radiodurans, with the aim of creating radiation-resistant bacteria.
Education
- 2022-04 - 2024-03
Master of Science and Technology in Applied Biological Science - Tokyo University of Science
- 2018 - 2022
Bachelor of Science and Technology in Applied Biological Science - Tokyo University of Science
- 2014 - 2017
Sendai Daiichi High School
Presentations
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- Poster Presentations:
- Hattori, T.*, Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
シングルセルゲノミクス研究会2022; August 30-31 2022; みやこめっせ 第二展示場 (京都市) - Hattori, T.*, Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
総合研究院データサイエンス医療研究部門・核酸創薬研究部門 合同シンポジウム; September 2022; 東京理科大学 葛飾キャンパス図書館大ホール - Hattori, T., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S.* "マウス精⼦形成過程における分化運命決定機構の解明"
NGS EXPO 2022; October 18-19, 2022; Osaka International Convention Center - Hattori, T.*, Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
The International Symposium "Totipotency and Germ Cell Development"; November 23-25, 2022; Centennial Hall Kyusyu University School of Medichine, Fukuoka, Japan - Sugiyama R., Otsuka K., Hattori T., Tatara M., Araki K., Iizuka M., Nakata I., Iguchi T., Masai H., Namekawa, S. H., Maezawa, S.* Dynamic nuclear lamina-chromatin interactions during spermatogenesis.
The International Symposium "Totipotency and Germ Cell Development"; November 23-25, 2022; Centennial Hall Kyusyu University School of Medichine, Fukuoka, Japan - Hattori, T.*, Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
The 45th Annual Meeting of the Molecular Biology Society of Japan; 2P-069; November 30 - December 2, 2022; Makuhari Messe International Exhibition Hall - Sugiyama R., Otsuka K., Hattori T., Tatara M., Araki K., Iizuka M., Nakata I., Iguchi T., Masai H., Namekawa, S. H., Maezawa, S.* Dynamic nuclear lamina-chromatin interactions during spermatogenesis.
The 45th Annual Meeting of the Molecular Biology Society of Japan; 2P-566; November 30 - December 2, 2022; Makuhari Messe International Exhibition Hall - Hattori, T.*, Sugiyama, R., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
総合研究院データサイエンス医療研究部門・デジタルトランスフォーメーション研究部門 合同シンポジウム; October 14, 2023; 東京理科大学 野田キャンパス7号館講堂 - Hattori, T.*, Sugiyama, R., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
The 14th International Workshop on Advanced Genomics (14AGW); October 4-6, 2023; Hitotsubashi Hall, National Center of Science Building - Hattori, T.*, Sugiyama, R., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
NGS EXPO 2023; November 15-16, 2023; Osaka International Convention Center - Hattori, T.*, Sugiyama, R., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals the important role of transcription factor SOX4 during mouse spermatogenesis.
The 46th Annual Meeting of the Molecular Biology Society of Japan; December 6-8, 2023; Kobe International Conference Center, Kobe International Exhibition Hall, Kobe Portopia Hotel - Hattori, T., Sugiyama, R., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S.* Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mammalian spermatogenesis.
The 46th Annual Meeting of the Molecular Biology Society of Japan; December 6-8, 2023; Kobe International Conference Center, Kobe International Exhibition Hall, Kobe Portopia Hotel - Hattori, T.*, Sugiyama, R., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
PAGS拡大班会議; December 25-26, 2023; Yokohama
- Hattori, T.*, Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
- Oral Presentations:
- Hattori, T.*, Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
The 45th Annual Meeting of the Molecular Biology Society of Japan; Workshop(2AW-15-3); November 30 - December 2, 2022; Makuhari Messe International Exhibition Hall - Hattori, T.*, Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
The 45th Annual Meeting of the Molecular Biology Society of Japan; Science Pitch(2SP-21-02); November 30 - December 2, 2022; Makuhari Messe International Exhibition Hall - Sugiyama R., Otsuka K., Hattori T., Tatara M., Araki K., Iizuka M., Nakata I., Iguchi T., Masai H., Namekawa, S. H., Maezawa, S.* Dynamic nuclear lamina-chromatin interactions during spermatogenesis.
The 45th Annual Meeting of the Molecular Biology Society of Japan; Workshop(2PW-15-4); November 30 - December 2, 2022; Makuhari Messe International Exhibition Hall - Hattori, T.*, Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. マウス精子形成過程における分化運命決定機構の解明
NGS 発生生物学現場の会 2022; December 7, 2022; 基礎生物学研究所 - Hattori, T.*, Sugiyama, R., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
NGS EXPO 2023; November 15-16, 2023; Osaka International Convention Center - Hattori, T.*, Otsuka K., Sugiyama, R., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
生殖ライフスパン若手の会; November 29 - December 1, 2023; Nagoya - Hattori, T.*, Sugiyama, R., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals the important role of transcription factor SOX4 during mouse spermatogenesis.
The 46th Annual Meeting of the Molecular Biology Society of Japan; Science Pitch; December 6-8, 2023; Kobe International Conference Center, Kobe International Exhibition Hall, Kobe Portopia Hotel - Hattori, T., Sugiyama, R., Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S.* Single-cell ATAC-seq reveals the important role of transcription factor SOX4 during mouse spermatogenesis.
The 46th Annual Meeting of the Molecular Biology Society of Japan; Workshop (2P-151); December 6-8, 2023; Kobe International Conference Center, Kobe International Exhibition Hall, Kobe Portopia Hotel
- Hattori, T.*, Watanabe, T., Sasaki, E., Namekawa, S. H., Maezawa, S. Single-cell ATAC-seq reveals stage-specific gene regulatory landscape during mouse spermatogenesis.
- Poster Presentations:
Skills
Programming | Python, R, Bash |
Tools | Docker, Jupyter, Linux, Git & GitHub, Firebase, Fusion 360, Inkscape, Figma, Canva |
Libraries | Python : Pandas, NumPy, Matplotlib, Seaborn, PyTorch, Scikit-learn R : tidyverse, related to bioinformatics |
Others | Raspberry Pi, 3D printer, Oculus Quest 2, Drones |